Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RxrbP28704 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RxrbP28704 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.62□□□□□ -0.23
RxrbP28704 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.62□□□□□ -0.23
RxrbP28704 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.62□□□□□ -0.23
RxrbP28704 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RxrbP28704 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.62□□□□□ -0.23
RxrbP28704 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
RxrbP28704 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
RxrbP28704 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Gm25287-201ENSMUST00000103846 110 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Gm22918-201ENSMUST00000103855 110 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RxrbP28704 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RxrbP28704 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 AA543401-201ENSMUST00000164248 1269 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.61□□□□□ -0.23
RxrbP28704 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.61□□□□□ -0.23
RxrbP28704 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Gm44771-201ENSMUST00000206975 626 ntBASIC13.61□□□□□ -0.23
RxrbP28704 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RxrbP28704 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.61□□□□□ -0.23
RxrbP28704 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RxrbP28704 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RxrbP28704 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
RxrbP28704 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
RxrbP28704 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RxrbP28704 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.6□□□□□ -0.23
RxrbP28704 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.6□□□□□ -0.23
RxrbP28704 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.6□□□□□ -0.23
RxrbP28704 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.6□□□□□ -0.23
RxrbP28704 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.6□□□□□ -0.23
RxrbP28704 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
RxrbP28704 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RxrbP28704 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RxrbP28704 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RxrbP28704 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RxrbP28704 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RxrbP28704 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms