Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col8a2P25318 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm25857-201ENSMUST00000082788 129 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.32□□□□□ -0.6
Col8a2P25318 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col8a2P25318 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.32□□□□□ -0.6
Col8a2P25318 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col8a2P25318 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.32□□□□□ -0.6
Col8a2P25318 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col8a2P25318 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Col8a2P25318 Gm11425-201ENSMUST00000119608 498 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Gm17150-201ENSMUST00000165577 381 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.31□□□□□ -0.6
Col8a2P25318 Gm42550-201ENSMUST00000201553 960 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Gm9396-201ENSMUST00000076703 567 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Gm24447-201ENSMUST00000083977 338 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Gm5356-201ENSMUST00000093326 615 ntBASIC11.31□□□□□ -0.6
Col8a2P25318 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.31□□□□□ -0.6
Col8a2P25318 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col8a2P25318 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.31□□□□□ -0.6
Col8a2P25318 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col8a2P25318 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col8a2P25318 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.3□□□□□ -0.6
Col8a2P25318 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms