Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TP20293 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.8□□□□□ -0.36
TP20293 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TP20293 Gm24694-201ENSMUST00000180054 110 ntBASIC12.8□□□□□ -0.36
TP20293 Gm27663-201ENSMUST00000184839 110 ntBASIC12.8□□□□□ -0.36
TP20293 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.8□□□□□ -0.36
TP20293 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TP20293 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TP20293 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.8□□□□□ -0.36
TP20293 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TP20293 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.8□□□□□ -0.36
TP20293 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TP20293 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.79□□□□□ -0.36
TP20293 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.79□□□□□ -0.36
TP20293 Gm29667-201ENSMUST00000190817 490 ntBASIC12.79□□□□□ -0.36
TP20293 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.79□□□□□ -0.36
TP20293 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.79□□□□□ -0.36
TP20293 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.79□□□□□ -0.36
TP20293 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.79□□□□□ -0.36
TP20293 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
TP20293 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TP20293 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TP20293 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TP20293 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TP20293 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.78□□□□□ -0.36
TP20293 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.78□□□□□ -0.36
TP20293 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.78□□□□□ -0.36
TP20293 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.78□□□□□ -0.36
TP20293 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TP20293 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TP20293 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.78□□□□□ -0.36
TP20293 Gm6912-201ENSMUST00000117218 544 ntBASIC12.78□□□□□ -0.36
TP20293 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.78□□□□□ -0.36
TP20293 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TP20293 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TP20293 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.78□□□□□ -0.36
TP20293 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.78□□□□□ -0.36
TP20293 Gm2445-201ENSMUST00000182798 989 ntBASIC12.78□□□□□ -0.36
TP20293 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.78□□□□□ -0.36
TP20293 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TP20293 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.78□□□□□ -0.36
TP20293 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TP20293 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TP20293 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TP20293 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms