Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.13□□□□□ -0.31
Fv4P11370 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.13□□□□□ -0.31
Fv4P11370 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.13□□□□□ -0.31
Fv4P11370 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.13□□□□□ -0.31
Fv4P11370 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.13□□□□□ -0.31
Fv4P11370 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.13□□□□□ -0.31
Fv4P11370 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Fv4P11370 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Fv4P11370 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.13□□□□□ -0.31
Fv4P11370 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fv4P11370 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.12□□□□□ -0.31
Fv4P11370 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Fv4P11370 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Gm13453-201ENSMUST00000118708 357 ntBASIC13.12□□□□□ -0.31
Fv4P11370 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Fv4P11370 Gm18905-201ENSMUST00000205454 928 ntBASIC13.12□□□□□ -0.31
Fv4P11370 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.12□□□□□ -0.31
Fv4P11370 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Fv4P11370 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.12□□□□□ -0.31
Fv4P11370 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Fv4P11370 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Fv4P11370 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Fv4P11370 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fv4P11370 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gm15678-201ENSMUST00000117573 960 ntBASIC13.11□□□□□ -0.31
Fv4P11370 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Gm17837-201ENSMUST00000186435 985 ntBASIC13.11□□□□□ -0.31
Fv4P11370 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.11□□□□□ -0.31
Fv4P11370 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gm7775-201ENSMUST00000218871 853 ntBASIC13.11□□□□□ -0.31
Fv4P11370 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.11□□□□□ -0.31
Fv4P11370 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.11□□□□□ -0.31
Fv4P11370 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.11□□□□□ -0.31
Fv4P11370 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fv4P11370 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms