Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp6P0C0A3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp6P0C0A3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Gm7488-201ENSMUST00000117148 684 ntBASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp6P0C0A3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp6P0C0A3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms