Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.51□□□□□ -0.25
Hoxb3P09026 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Gm11597-201ENSMUST00000121423 964 ntBASIC13.51□□□□□ -0.25
Hoxb3P09026 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.51□□□□□ -0.25
Hoxb3P09026 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Gm24644-201ENSMUST00000157114 139 ntBASIC13.51□□□□□ -0.25
Hoxb3P09026 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.51□□□□□ -0.25
Hoxb3P09026 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.51□□□□□ -0.25
Hoxb3P09026 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxb3P09026 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.5□□□□□ -0.25
Hoxb3P09026 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Gm29107-201ENSMUST00000190910 347 ntBASIC13.5□□□□□ -0.25
Hoxb3P09026 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.5□□□□□ -0.25
Hoxb3P09026 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Gm45219-201ENSMUST00000205602 465 ntBASIC13.5□□□□□ -0.25
Hoxb3P09026 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Gm8894-201ENSMUST00000074642 666 ntBASIC13.5□□□□□ -0.25
Hoxb3P09026 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.5□□□□□ -0.25
Hoxb3P09026 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxb3P09026 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxb3P09026 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hoxb3P09026 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hoxb3P09026 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Gm12467-201ENSMUST00000117625 745 ntBASIC13.49□□□□□ -0.25
Hoxb3P09026 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxb3P09026 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxb3P09026 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxb3P09026 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.49□□□□□ -0.25
Hoxb3P09026 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.49□□□□□ -0.25
Hoxb3P09026 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxb3P09026 Gm43553-201ENSMUST00000200900 685 ntBASIC13.49□□□□□ -0.25
Hoxb3P09026 Gm44100-201ENSMUST00000204329 436 ntBASIC13.49□□□□□ -0.25
Hoxb3P09026 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxb3P09026 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms