Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P04212 Gm28630-201ENSMUST00000187806 498 ntBASIC11.05□□□□□ -0.64
P04212 Gm33320-201ENSMUST00000192232 530 ntBASIC11.05□□□□□ -0.64
P04212 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.05□□□□□ -0.64
P04212 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.05□□□□□ -0.64
P04212 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.05□□□□□ -0.64
P04212 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P04212 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.05□□□□□ -0.64
P04212 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.05□□□□□ -0.64
P04212 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P04212 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.05□□□□□ -0.64
P04212 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04212 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.04□□□□□ -0.64
P04212 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.04□□□□□ -0.64
P04212 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
P04212 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.04□□□□□ -0.64
P04212 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.04□□□□□ -0.64
P04212 Mir449b-201ENSMUST00000104833 80 ntBASIC11.04□□□□□ -0.64
P04212 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.04□□□□□ -0.64
P04212 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Mir1897-201ENSMUST00000122581 272 ntBASIC11.04□□□□□ -0.64
P04212 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.04□□□□□ -0.64
P04212 Gm5312-201ENSMUST00000203728 547 ntBASIC11.04□□□□□ -0.64
P04212 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.04□□□□□ -0.64
P04212 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.04□□□□□ -0.64
P04212 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.04□□□□□ -0.64
P04212 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P04212 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04212 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04212 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P04212 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04212 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.03□□□□□ -0.64
P04212 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P04212 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Gm15460-201ENSMUST00000118147 391 ntBASIC11.03□□□□□ -0.64
P04212 Gm15653-201ENSMUST00000119247 907 ntBASIC11.03□□□□□ -0.64
P04212 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.03□□□□□ -0.64
P04212 Gm15693-201ENSMUST00000120470 637 ntBASIC11.03□□□□□ -0.64
P04212 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
P04212 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.03□□□□□ -0.64
P04212 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.03□□□□□ -0.64
P04212 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04212 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.03□□□□□ -0.64
P04212 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.03□□□□□ -0.64
P04212 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.03□□□□□ -0.64
P04212 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
P04212 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04212 Mir497b-201ENSMUST00000093601 125 ntBASIC11.03□□□□□ -0.64
P04212 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms