Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.8□□□□□ -0.36
Krt1P04104 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt1P04104 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Rubie-203ENSMUST00000227803 2430 ntBASIC12.79□□□□□ -0.36
Krt1P04104 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Krt1P04104 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Krt1P04104 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.79□□□□□ -0.36
Krt1P04104 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Krt1P04104 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.79□□□□□ -0.36
Krt1P04104 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
Krt1P04104 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt1P04104 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt1P04104 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Krt1P04104 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.78□□□□□ -0.36
Krt1P04104 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.78□□□□□ -0.36
Krt1P04104 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Krt1P04104 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Gm15173-201ENSMUST00000122049 433 ntBASIC12.78□□□□□ -0.36
Krt1P04104 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.78□□□□□ -0.36
Krt1P04104 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Krt1P04104 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.78□□□□□ -0.36
Krt1P04104 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.78□□□□□ -0.36
Krt1P04104 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.78□□□□□ -0.36
Krt1P04104 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.78□□□□□ -0.36
Krt1P04104 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Krt1P04104 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Krt1P04104 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt1P04104 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt1P04104 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt1P04104 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt1P04104 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms