Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.9□□□□□ -0.83
TcraP01849 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
TcraP01849 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.9□□□□□ -0.83
TcraP01849 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
TcraP01849 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.83
TcraP01849 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
TcraP01849 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
TcraP01849 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
TcraP01849 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
TcraP01849 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.89□□□□□ -0.83
TcraP01849 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.89□□□□□ -0.83
TcraP01849 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.89□□□□□ -0.83
TcraP01849 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
TcraP01849 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.89□□□□□ -0.83
TcraP01849 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 AC138767.1-201ENSMUST00000222661 415 ntBASIC9.89□□□□□ -0.83
TcraP01849 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.89□□□□□ -0.83
TcraP01849 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
TcraP01849 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC9.89□□□□□ -0.83
TcraP01849 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
TcraP01849 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.89□□□□□ -0.83
TcraP01849 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TcraP01849 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.88□□□□□ -0.83
TcraP01849 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.88□□□□□ -0.83
TcraP01849 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.88□□□□□ -0.83
TcraP01849 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
TcraP01849 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
TcraP01849 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
TcraP01849 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
TcraP01849 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
TcraP01849 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.88□□□□□ -0.83
TcraP01849 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Gm2651-201ENSMUST00000203560 838 ntBASIC9.88□□□□□ -0.83
TcraP01849 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.88□□□□□ -0.83
TcraP01849 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
TcraP01849 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.88□□□□□ -0.83
TcraP01849 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TcraP01849 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms