Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm13570-201ENSMUST00000140763 309 ntBASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm29741-201ENSMUST00000192667 421 ntBASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm13097-201ENSMUST00000210722 397 ntBASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm17330-201ENSMUST00000221047 165 ntBASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm24548-201ENSMUST00000158650 108 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm20426-201ENSMUST00000173657 440 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm31256-201ENSMUST00000194705 506 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm38317-201ENSMUST00000195564 343 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm5781-201ENSMUST00000219792 443 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf17O88472 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Gm37042-201ENSMUST00000193816 581 ntBASIC12.54□□□□□ -0.4
Tnfrsf17O88472 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf17O88472 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms