Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Gm43758-201ENSMUST00000199500 367 ntBASIC14.09□□□□□ -0.15
Ttc3O88196 Gm6013-201ENSMUST00000212264 699 ntBASIC14.09□□□□□ -0.15
Ttc3O88196 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.09□□□□□ -0.15
Ttc3O88196 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.09□□□□□ -0.15
Ttc3O88196 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Ttc3O88196 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.09□□□□□ -0.15
Ttc3O88196 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc3O88196 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.09□□□□□ -0.15
Ttc3O88196 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc3O88196 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc3O88196 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc3O88196 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc3O88196 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ttc3O88196 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ttc3O88196 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.08□□□□□ -0.16
Ttc3O88196 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ttc3O88196 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ttc3O88196 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.08□□□□□ -0.16
Ttc3O88196 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.08□□□□□ -0.16
Ttc3O88196 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.08□□□□□ -0.16
Ttc3O88196 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ttc3O88196 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc3O88196 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ttc3O88196 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.07□□□□□ -0.16
Ttc3O88196 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Gm8805-201ENSMUST00000117848 313 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Gm11637-201ENSMUST00000120601 592 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.07□□□□□ -0.16
Ttc3O88196 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.07□□□□□ -0.16
Ttc3O88196 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.07□□□□□ -0.16
Ttc3O88196 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.07□□□□□ -0.16
Ttc3O88196 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.07□□□□□ -0.16
Ttc3O88196 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc3O88196 Gm27501-201ENSMUST00000183599 107 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Gm37042-201ENSMUST00000193816 581 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Gm38158-201ENSMUST00000194617 339 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Gm42627-201ENSMUST00000197347 224 ntBASIC14.07□□□□□ -0.16
Ttc3O88196 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms