Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf13O54965 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf13O54965 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf13O54965 Gm9824-201ENSMUST00000178707 561 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Gm8000-201ENSMUST00000188378 592 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf13O54965 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf13O54965 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf13O54965 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf13O54965 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rnf13O54965 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rnf13O54965 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Rnf13O54965 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf13O54965 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Mir698-201ENSMUST00000102164 109 ntBASIC12.29□□□□□ -0.44
Rnf13O54965 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rnf13O54965 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.29□□□□□ -0.44
Rnf13O54965 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf13O54965 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.29□□□□□ -0.44
Rnf13O54965 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf13O54965 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.29□□□□□ -0.44
Rnf13O54965 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf13O54965 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf13O54965 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf13O54965 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf13O54965 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf13O54965 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.28□□□□□ -0.44
Rnf13O54965 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rnf13O54965 Gm13365-201ENSMUST00000121188 973 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.28□□□□□ -0.44
Rnf13O54965 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf13O54965 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf13O54965 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms