Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.35□□□□□ -0.11
Itgb3O54890 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Gm43433-201ENSMUST00000196573 481 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.35□□□□□ -0.11
Itgb3O54890 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.35□□□□□ -0.11
Itgb3O54890 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Itgb3O54890 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Gm26315-201ENSMUST00000083890 321 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.35□□□□□ -0.11
Itgb3O54890 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Itgb3O54890 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Itgb3O54890 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.34□□□□□ -0.11
Itgb3O54890 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.34□□□□□ -0.11
Itgb3O54890 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.34□□□□□ -0.11
Itgb3O54890 Gm17150-201ENSMUST00000165577 381 ntBASIC14.34□□□□□ -0.11
Itgb3O54890 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.34□□□□□ -0.11
Itgb3O54890 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Itgb3O54890 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.34□□□□□ -0.11
Itgb3O54890 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Itgb3O54890 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Itgb3O54890 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Itgb3O54890 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.33□□□□□ -0.11
Itgb3O54890 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.33□□□□□ -0.11
Itgb3O54890 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Itgb3O54890 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Itgb3O54890 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Itgb3O54890 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Itgb3O54890 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Itgb3O54890 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Itgb3O54890 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.33□□□□□ -0.12
Itgb3O54890 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.33□□□□□ -0.12
Itgb3O54890 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Itgb3O54890 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Itgb3O54890 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.33□□□□□ -0.12
Itgb3O54890 Gm13612-201ENSMUST00000119276 390 ntBASIC14.33□□□□□ -0.12
Itgb3O54890 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.33□□□□□ -0.12
Itgb3O54890 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms