Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.07□□□□□ -0.48
Lsm2O35900 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.07□□□□□ -0.48
Lsm2O35900 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Lsm2O35900 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm2O35900 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm2O35900 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Lsm2O35900 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm2O35900 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.06□□□□□ -0.48
Lsm2O35900 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm2O35900 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm2O35900 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm2O35900 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.06□□□□□ -0.48
Lsm2O35900 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm2O35900 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.06□□□□□ -0.48
Lsm2O35900 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.06□□□□□ -0.48
Lsm2O35900 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm2O35900 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm2O35900 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm2O35900 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm2O35900 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Gm38225-201ENSMUST00000194001 393 ntBASIC12.05□□□□□ -0.48
Lsm2O35900 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.05□□□□□ -0.48
Lsm2O35900 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm2O35900 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm2O35900 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm2O35900 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm2O35900 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm2O35900 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.04□□□□□ -0.48
Lsm2O35900 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm2O35900 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm2O35900 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms