Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.33□□□□□ -0.44
Matn3O35701 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.33□□□□□ -0.44
Matn3O35701 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.33□□□□□ -0.44
Matn3O35701 Gm44719-201ENSMUST00000206404 149 ntBASIC12.33□□□□□ -0.44
Matn3O35701 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.33□□□□□ -0.44
Matn3O35701 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Matn3O35701 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Matn3O35701 Paupar-201ENSMUST00000194826 3482 ntBASIC12.33□□□□□ -0.44
Matn3O35701 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Matn3O35701 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.33□□□□□ -0.44
Matn3O35701 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.33□□□□□ -0.44
Matn3O35701 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.33□□□□□ -0.44
Matn3O35701 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Matn3O35701 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Gm16198-201ENSMUST00000118766 670 ntBASIC12.32□□□□□ -0.44
Matn3O35701 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.32□□□□□ -0.44
Matn3O35701 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.32□□□□□ -0.44
Matn3O35701 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.32□□□□□ -0.44
Matn3O35701 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Matn3O35701 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
Matn3O35701 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.32□□□□□ -0.44
Matn3O35701 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Matn3O35701 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Matn3O35701 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.31□□□□□ -0.44
Matn3O35701 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.31□□□□□ -0.44
Matn3O35701 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn3O35701 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Gm15957-201ENSMUST00000118893 974 ntBASIC12.31□□□□□ -0.44
Matn3O35701 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.31□□□□□ -0.44
Matn3O35701 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.31□□□□□ -0.44
Matn3O35701 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.31□□□□□ -0.44
Matn3O35701 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Matn3O35701 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms