Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.59□□□□□ -0.07
Nr1i3O35627 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.59□□□□□ -0.07
Nr1i3O35627 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nr1i3O35627 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nr1i3O35627 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nr1i3O35627 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nr1i3O35627 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nr1i3O35627 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nr1i3O35627 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nr1i3O35627 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Nr1i3O35627 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
Nr1i3O35627 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Nr1i3O35627 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Gm4875-201ENSMUST00000118257 786 ntBASIC14.58□□□□□ -0.08
Nr1i3O35627 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Gm17837-201ENSMUST00000186435 985 ntBASIC14.58□□□□□ -0.08
Nr1i3O35627 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nr1i3O35627 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.58□□□□□ -0.08
Nr1i3O35627 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nr1i3O35627 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nr1i3O35627 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nr1i3O35627 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.57□□□□□ -0.08
Nr1i3O35627 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nr1i3O35627 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms