Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atf6bO35451 Gm2423-201ENSMUST00000074863 733 ntBASIC11.82□□□□□ -0.52
Atf6bO35451 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atf6bO35451 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Atf6bO35451 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.81□□□□□ -0.52
Atf6bO35451 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Syt7-205ENSMUST00000224135 1557 ntBASIC11.81□□□□□ -0.52
Atf6bO35451 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.81□□□□□ -0.52
Atf6bO35451 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Atf6bO35451 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Gm21854-201ENSMUST00000179901 471 ntBASIC11.81□□□□□ -0.52
Atf6bO35451 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.81□□□□□ -0.52
Atf6bO35451 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.81□□□□□ -0.52
Atf6bO35451 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Atf6bO35451 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Atf6bO35451 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Atf6bO35451 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.8□□□□□ -0.52
Atf6bO35451 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Gm22189-201ENSMUST00000103822 86 ntBASIC11.8□□□□□ -0.52
Atf6bO35451 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf6bO35451 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.8□□□□□ -0.52
Atf6bO35451 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.8□□□□□ -0.52
Atf6bO35451 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf6bO35451 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.8□□□□□ -0.52
Atf6bO35451 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.8□□□□□ -0.52
Atf6bO35451 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms