Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Efnb3O35393 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Efnb3O35393 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.72□□□□□ -0.69
Efnb3O35393 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Gm5867-201ENSMUST00000063197 592 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Efnb3O35393 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Syt7-205ENSMUST00000224135 1557 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.72□□□□□ -0.69
Efnb3O35393 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Efnb3O35393 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Efnb3O35393 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Rprl2-201ENSMUST00000157150 290 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Efnb3O35393 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms