Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.64□□□□□ -0.39
Hps1O08983 Gm13453-201ENSMUST00000118708 357 ntBASIC12.64□□□□□ -0.39
Hps1O08983 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hps1O08983 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.64□□□□□ -0.39
Hps1O08983 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Hps1O08983 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Hps1O08983 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.64□□□□□ -0.39
Hps1O08983 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hps1O08983 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Hps1O08983 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hps1O08983 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hps1O08983 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.63□□□□□ -0.39
Hps1O08983 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Gm6415-201ENSMUST00000118488 348 ntBASIC12.63□□□□□ -0.39
Hps1O08983 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Gm5479-201ENSMUST00000160578 435 ntBASIC12.63□□□□□ -0.39
Hps1O08983 Gm8584-201ENSMUST00000171982 758 ntBASIC12.63□□□□□ -0.39
Hps1O08983 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Hps1O08983 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Hps1O08983 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hps1O08983 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hps1O08983 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hps1O08983 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hps1O08983 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hps1O08983 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hps1O08983 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.62□□□□□ -0.39
Hps1O08983 Gm2423-201ENSMUST00000074863 733 ntBASIC12.62□□□□□ -0.39
Hps1O08983 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hps1O08983 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hps1O08983 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms