Protein–RNA interactions for Protein: F2Z461

Herc6, E3 ISG15--protein ligase Herc6, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6F2Z461 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc6F2Z461 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Herc6F2Z461 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.16□□□□□ -0.3
Herc6F2Z461 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Herc6F2Z461 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc6F2Z461 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc6F2Z461 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.15□□□□□ -0.3
Herc6F2Z461 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.15□□□□□ -0.3
Herc6F2Z461 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Gm6415-201ENSMUST00000118488 348 ntBASIC13.15□□□□□ -0.3
Herc6F2Z461 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.15□□□□□ -0.3
Herc6F2Z461 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Gm27702-201ENSMUST00000184512 56 ntBASIC13.15□□□□□ -0.3
Herc6F2Z461 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.15□□□□□ -0.3
Herc6F2Z461 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Herc6F2Z461 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc6F2Z461 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Herc6F2Z461 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Herc6F2Z461 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Herc6F2Z461 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Gm15653-201ENSMUST00000119247 907 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Gm15693-201ENSMUST00000120470 637 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Gm33320-201ENSMUST00000192232 530 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Gm6916-202ENSMUST00000205523 195 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Herc6F2Z461 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.14□□□□□ -0.31
Herc6F2Z461 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc6F2Z461 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.13□□□□□ -0.31
Herc6F2Z461 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc6F2Z461 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc6F2Z461 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc6F2Z461 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc6F2Z461 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herc6F2Z461 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herc6F2Z461 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc6F2Z461 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc6F2Z461 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms