Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Gm16379-201ENSMUST00000161469 348 ntBASIC16.21■□□□□ 0.19
Ube4aE9Q735 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Gm8762-201ENSMUST00000193486 339 ntBASIC16.21■□□□□ 0.19
Ube4aE9Q735 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.21■□□□□ 0.19
Ube4aE9Q735 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ube4aE9Q735 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.21■□□□□ 0.18
Ube4aE9Q735 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.2■□□□□ 0.18
Ube4aE9Q735 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Gm14723-201ENSMUST00000118686 215 ntBASIC16.2■□□□□ 0.18
Ube4aE9Q735 Gm11793-201ENSMUST00000120433 981 ntBASIC16.2■□□□□ 0.18
Ube4aE9Q735 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.2■□□□□ 0.18
Ube4aE9Q735 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.2■□□□□ 0.18
Ube4aE9Q735 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4aE9Q735 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4aE9Q735 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms