Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cpsf4lE9Q2N0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4lE9Q2N0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Mir6392-201ENSMUST00000184924 108 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm18307-201ENSMUST00000206864 949 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm45668-201ENSMUST00000211271 493 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm15823-201ENSMUST00000064305 670 ntBASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4lE9Q2N0 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cpsf4lE9Q2N0 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms