Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Gm1848-201ENSMUST00000120711 789 ntBASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Gm9645-201ENSMUST00000197131 792 ntBASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Gm23675-201ENSMUST00000157311 125 ntBASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Gm10731-201ENSMUST00000181171 448 ntBASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm9136-201ENSMUST00000193368 454 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm44980-201ENSMUST00000205826 314 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm23255-201ENSMUST00000102244 110 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm15770-201ENSMUST00000117498 584 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Gm3332-201ENSMUST00000189337 928 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a3E9PWQ3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Gm44158-201ENSMUST00000203881 505 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms