Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Rps4l-202ENSMUST00000204242 789 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm7046-201ENSMUST00000221351 977 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Gm12997-201ENSMUST00000120207 640 ntBASIC12.14□□□□□ -0.47
Shank1D3YZU1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Gm25261-201ENSMUST00000157416 134 ntBASIC12.14□□□□□ -0.47
Shank1D3YZU1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Gm29741-201ENSMUST00000192667 421 ntBASIC12.14□□□□□ -0.47
Shank1D3YZU1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shank1D3YZU1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm14350-201ENSMUST00000116642 640 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm5687-201ENSMUST00000118252 640 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm5363-201ENSMUST00000211927 938 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Itm2b-204ENSMUST00000228637 783 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm11618-201ENSMUST00000117946 267 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm13123-201ENSMUST00000122173 492 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Gm6082-201ENSMUST00000215204 454 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Mir433-201ENSMUST00000093564 124 ntBASIC12.13□□□□□ -0.47
Shank1D3YZU1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shank1D3YZU1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms