Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Mir449b-201ENSMUST00000104833 80 ntBASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc22a28B2RT89 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc22a28B2RT89 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Gm5312-201ENSMUST00000203728 547 ntBASIC12.52□□□□□ -0.41
Slc22a28B2RT89 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc22a28B2RT89 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm24513-201ENSMUST00000174964 138 ntBASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm3436-201ENSMUST00000179930 840 ntBASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms