Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Gm11543-201ENSMUST00000120758 370 ntBASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm12887B1AVM1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm6973-201ENSMUST00000117080 721 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Ank2-226ENSMUST00000189368 339 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm12887B1AVM1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms