Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm13492-201ENSMUST00000119772 665 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm15547-201ENSMUST00000122152 333 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm3096-201ENSMUST00000185770 364 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.66□□□□□ -0.22
Col4a6B1AVK5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Gm12291-201ENSMUST00000121627 311 ntBASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Gm8712-201ENSMUST00000221090 701 ntBASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col4a6B1AVK5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col4a6B1AVK5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Gm22334-201ENSMUST00000158070 133 ntBASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.64□□□□□ -0.23
Col4a6B1AVK5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms