Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ubr4A2AN08 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ubr4A2AN08 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC6.96□□□□□ -1.3
Ubr4A2AN08 Gzmn-202ENSMUST00000225535 989 ntBASIC6.96□□□□□ -1.3
Ubr4A2AN08 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 AC122305.4-201ENSMUST00000216159 1206 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Carlr-201ENSMUST00000181515 2574 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm6198-201ENSMUST00000191337 2929 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 AC093043.3-201ENSMUST00000226531 2273 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm14371-201ENSMUST00000138925 1518 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm28071-201ENSMUST00000190355 478 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 AC158392.3-201ENSMUST00000224271 1284 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm17541-201ENSMUST00000080062 525 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm14314-201ENSMUST00000118225 1015 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 Gm12453-201ENSMUST00000121981 331 ntBASIC6.95□□□□□ -1.3
Ubr4A2AN08 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ubr4A2AN08 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ubr4A2AN08 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Gm8228-201ENSMUST00000189949 2192 ntBASIC6.94□□□□□ -1.3
Ubr4A2AN08 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Gm6397-201ENSMUST00000161973 1069 ntBASIC6.94□□□□□ -1.3
Ubr4A2AN08 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ubr4A2AN08 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ubr4A2AN08 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms