Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc39aA2ACP1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc39aA2ACP1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc39aA2ACP1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Itm2b-204ENSMUST00000228637 783 ntBASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc39aA2ACP1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc39aA2ACP1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gm5687-201ENSMUST00000118252 640 ntBASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gm8062-201ENSMUST00000139696 444 ntBASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc39aA2ACP1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms