Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Mir1895-201ENSMUST00000122615 79 ntBASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav12d-1A0N8R0 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gm8927-201ENSMUST00000181978 981 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gm21470-201ENSMUST00000187680 696 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gm29541-201ENSMUST00000191351 678 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gm3222-201ENSMUST00000071282 990 ntBASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav12d-1A0N8R0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav12d-1A0N8R0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav12d-1A0N8R0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav12d-1A0N8R0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Trav12d-1A0N8R0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms