Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm6912-201ENSMUST00000117218 544 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm14719-201ENSMUST00000121891 340 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Mir7684-201ENSMUST00000183858 60 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm27838-201ENSMUST00000184829 128 ntBASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm17795-201ENSMUST00000214505 757 ntBASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm20445-201ENSMUST00000061905 565 ntBASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lnp1A0A1B0GSK3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lnp1A0A1B0GSK3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms