Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm37500-201ENSMUST00000192059 1443 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav8-1A0A075B641 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms