Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm12728V9GX31 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.9□□□□□ -0.66
Gm12728V9GX31 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.9□□□□□ -0.66
Gm12728V9GX31 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Gm45453-201ENSMUST00000211758 853 ntBASIC10.9□□□□□ -0.66
Gm12728V9GX31 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm12728V9GX31 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm12728V9GX31 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.9□□□□□ -0.67
Gm12728V9GX31 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Gm12728V9GX31 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.89□□□□□ -0.67
Gm12728V9GX31 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Gm37714-201ENSMUST00000194742 342 ntBASIC10.89□□□□□ -0.67
Gm12728V9GX31 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.89□□□□□ -0.67
Gm12728V9GX31 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm12728V9GX31 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms