Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.04□□□□□ -0.32
Ccdc166S4R181 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.04□□□□□ -0.32
Ccdc166S4R181 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.04□□□□□ -0.32
Ccdc166S4R181 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc166S4R181 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm15429-201ENSMUST00000151268 798 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm27839-201ENSMUST00000184242 106 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm45331-201ENSMUST00000209868 554 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm17794-201ENSMUST00000220252 955 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc166S4R181 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc166S4R181 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc166S4R181 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.02□□□□□ -0.33
Ccdc166S4R181 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc166S4R181 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc166S4R181 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms