Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Mir698-201ENSMUST00000102164 109 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gm13385-201ENSMUST00000121089 220 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.54□□□□□ -0.4
ClcnkaQ9WUB7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Gm27838-201ENSMUST00000184829 128 ntBASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ClcnkaQ9WUB7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClcnkaQ9WUB7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms