Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Gm27847-201ENSMUST00000183711 107 ntBASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Gm27375-201ENSMUST00000183799 107 ntBASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Gm27682-201ENSMUST00000183930 110 ntBASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn8aQ9WTU3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn8aQ9WTU3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Scn8aQ9WTU3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn8aQ9WTU3 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms