Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gm29608-201ENSMUST00000190444 463 ntBASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gm9908-201ENSMUST00000211534 448 ntBASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nr2e3Q9QXZ7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm8515-201ENSMUST00000194852 576 ntBASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm6745-201ENSMUST00000199216 526 ntBASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr2e3Q9QXZ7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nr2e3Q9QXZ7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nr2e3Q9QXZ7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nr2e3Q9QXZ7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Gm7063-201ENSMUST00000186840 981 ntBASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Gm42550-201ENSMUST00000201553 960 ntBASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr2e3Q9QXZ7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Gm38144-201ENSMUST00000192790 465 ntBASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Gm38223-201ENSMUST00000194484 695 ntBASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr2e3Q9QXZ7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms