Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3aQ9JKX8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3aQ9JKX8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gm15371-201ENSMUST00000117057 784 ntBASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gm15429-201ENSMUST00000151268 798 ntBASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gm6983-201ENSMUST00000214912 628 ntBASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3aQ9JKX8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm12091-201ENSMUST00000146791 830 ntBASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm23984-201ENSMUST00000157139 203 ntBASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm27701-201ENSMUST00000184498 110 ntBASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms