Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Gm9682-201ENSMUST00000197505 556 ntBASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.15□□□□□ -0.46
Trem1Q9JKE2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trem1Q9JKE2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trem1Q9JKE2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trem1Q9JKE2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trem1Q9JKE2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trem1Q9JKE2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trem1Q9JKE2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Gm5682-201ENSMUST00000173402 505 ntBASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trem1Q9JKE2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms