Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3bl1Q9D701 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Upk3bl1Q9D701 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm14913-201ENSMUST00000120011 1093 ntBASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm43037-201ENSMUST00000196808 250 ntBASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm18669-201ENSMUST00000216049 778 ntBASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bl1Q9D701 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Gm15173-201ENSMUST00000122049 433 ntBASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Gm6550-201ENSMUST00000187574 993 ntBASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bl1Q9D701 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.37□□□□□ -0.43
Upk3bl1Q9D701 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms