Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nop56Q9D6Z1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nop56Q9D6Z1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm29310-201ENSMUST00000185468 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21825-201ENSMUST00000185728 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm29109-201ENSMUST00000185895 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21896-201ENSMUST00000186520 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21873-201ENSMUST00000186728 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21794-201ENSMUST00000187056 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21880-201ENSMUST00000187275 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21826-201ENSMUST00000187451 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21198-201ENSMUST00000188393 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21749-201ENSMUST00000189343 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21901-201ENSMUST00000189568 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm29424-201ENSMUST00000189716 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm28599-201ENSMUST00000189838 694 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21867-201ENSMUST00000189917 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm29269-201ENSMUST00000190087 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21722-201ENSMUST00000190153 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm28423-201ENSMUST00000190701 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21899-201ENSMUST00000190745 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21910-201ENSMUST00000191163 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21849-201ENSMUST00000191571 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm28678-201ENSMUST00000191593 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm20910-201ENSMUST00000193268 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm21871-201ENSMUST00000194621 696 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nop56Q9D6Z1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nop56Q9D6Z1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14□□□□□ -0.17
Nop56Q9D6Z1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14□□□□□ -0.17
Nop56Q9D6Z1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Gm13823-201ENSMUST00000119930 345 ntBASIC14□□□□□ -0.17
Nop56Q9D6Z1 Gm6222-201ENSMUST00000120787 396 ntBASIC14□□□□□ -0.17
Nop56Q9D6Z1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nop56Q9D6Z1 AA619741-201ENSMUST00000195095 646 ntBASIC14□□□□□ -0.17
Nop56Q9D6Z1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms