Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Gm9385-201ENSMUST00000117563 472 ntBASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Gm43347-201ENSMUST00000200226 580 ntBASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sf3a3Q9D554 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Gm7230-201ENSMUST00000173026 815 ntBASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Gm18669-201ENSMUST00000216049 778 ntBASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sf3a3Q9D554 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3a3Q9D554 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms