Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stag1Q9D3E6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Gm27572-201ENSMUST00000183702 255 ntBASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stag1Q9D3E6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm4271-201ENSMUST00000174444 973 ntBASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.13■□□□□ 0.17
Stag1Q9D3E6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stag1Q9D3E6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.12■□□□□ 0.17
Stag1Q9D3E6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms