Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk1aQ9D132 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gm12428-201ENSMUST00000119844 727 ntBASIC12.86□□□□□ -0.35
Upk1aQ9D132 Mir1895-201ENSMUST00000122615 79 ntBASIC12.86□□□□□ -0.35
Upk1aQ9D132 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gm18049-201ENSMUST00000208909 581 ntBASIC12.86□□□□□ -0.35
Upk1aQ9D132 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.86□□□□□ -0.35
Upk1aQ9D132 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.86□□□□□ -0.35
Upk1aQ9D132 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk1aQ9D132 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.85□□□□□ -0.35
Upk1aQ9D132 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk1aQ9D132 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms