Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gm5279-201ENSMUST00000199575 745 ntBASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx56Q9D0R4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ddx56Q9D0R4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx56Q9D0R4 Gm22189-201ENSMUST00000103822 86 ntBASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Gm28760-201ENSMUST00000185995 736 ntBASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx56Q9D0R4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms