Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chaf1bQ9D0N7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chaf1bQ9D0N7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gm6222-201ENSMUST00000120787 396 ntBASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gm11025-201ENSMUST00000140773 466 ntBASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gm18027-201ENSMUST00000218947 619 ntBASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms