Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm25287-201ENSMUST00000103846 110 ntBASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm22918-201ENSMUST00000103855 110 ntBASIC13.49□□□□□ -0.25
Ssu72Q9CY97 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm18733-201ENSMUST00000173950 856 ntBASIC13.49□□□□□ -0.25
Ssu72Q9CY97 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.49□□□□□ -0.25
Ssu72Q9CY97 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssu72Q9CY97 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm9824-201ENSMUST00000178707 561 ntBASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm18766-201ENSMUST00000189811 808 ntBASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm33320-201ENSMUST00000192232 530 ntBASIC13.48□□□□□ -0.25
Ssu72Q9CY97 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm45841-201ENSMUST00000207700 164 ntBASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Gm10819-201ENSMUST00000099988 561 ntBASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ssu72Q9CY97 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms