Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Gm13385-201ENSMUST00000121089 220 ntBASIC15.99■□□□□ 0.15
Smc3Q9CW03 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.98■□□□□ 0.15
Smc3Q9CW03 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Gm15393-201ENSMUST00000120499 219 ntBASIC15.98■□□□□ 0.15
Smc3Q9CW03 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Gm2756-201ENSMUST00000195851 400 ntBASIC15.98■□□□□ 0.15
Smc3Q9CW03 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smc3Q9CW03 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.97■□□□□ 0.15
Smc3Q9CW03 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.97■□□□□ 0.15
Smc3Q9CW03 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.97■□□□□ 0.15
Smc3Q9CW03 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smc3Q9CW03 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.97■□□□□ 0.15
Smc3Q9CW03 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc3Q9CW03 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Gm4804-201ENSMUST00000182234 999 ntBASIC15.96■□□□□ 0.15
Smc3Q9CW03 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Smc3Q9CW03 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms