Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Gm15823-201ENSMUST00000064305 670 ntBASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smc1aQ9CU62 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1aQ9CU62 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm37917-201ENSMUST00000194711 392 ntBASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm45668-201ENSMUST00000211271 493 ntBASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smc1aQ9CU62 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1aQ9CU62 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Smc1aQ9CU62 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smc1aQ9CU62 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smc1aQ9CU62 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms