Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm7Q9CQQ8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Gm13612-201ENSMUST00000119276 390 ntBASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Gm6152-201ENSMUST00000151704 340 ntBASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm7Q9CQQ8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Itm2b-204ENSMUST00000228637 783 ntBASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm7Q9CQQ8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms